BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036F08SP1|AL430264
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1767 1273 0.0
>3x_Contig1767
Length = 23302
Score = 1273 bits (640), Expect = 0.0
Identities = 734/768 (95%)
Strand = Plus / Minus
Query: 1 aatccgttatcttctactatcggcactaatgtccgttttcaatctaatggtataagtcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 aatccgttatcttctactatcggcactaatgtccgttttcaatctaatggtataagtcaa 750
Query: 61 agggccttgtgcaacttagcagtgaatatacagtatttaaaggctcatttcaaacaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 agggccttgtgcaacttagcagtgaatatacagtatttaaaggctcatttcaaacaataa 690
Query: 121 aagcaaacatttgtaattaaaacaaaagaacaagattaggctaagcctcaaatactgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 aagcaaacatttgtaattaaaacaaaagaacaagattaggctaagcctcaaatactgctt 630
Query: 181 tatatccgaggatgtaccaaagatatttagaagaacttatagacacattatcctgcttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tatatccgaggatgtaccaaagatatttagaagaacttatagacacattatcctgcttct 570
Query: 241 attccttttcccttagtgttttacttttcgaaaagttgatgtatattttaacatgcatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 attccttttcccttagtgttttacttttcgaaaagttgatgtatattttaacatgcatta 510
Query: 301 aaggcttaatccggaaatctcgattaggtaatttcattaaaggtccgaattggttaaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aaggcttaatccggaaatctcgattaggtaatttcattaaaggtccgaattggttaaagt 450
Query: 361 tatggcactgacaataagagtttggttattaacgtaccaattaggaaggratggctggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 449 tatggcactgacaataagagtttggttattaacgtaccaattaggaaggaatggctggtg 390
Query: 421 taatagagtctacatggtatctaggtactaaggractataaacttattcaaaacatgagg 480
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 389 taatagagtctacatggtatctaggtactaaggaactataaacttattcaaaacatgagg 330
Query: 481 ttttgaataagttaccccaaaattatatgtsagttgatggggagttgcatagggatgaac 540
|||||||||| ||||||||||||||||| | |||| ||||||||||||||||||||||||
Sbjct: 329 ttttgaataatttaccccaaaattatatttaagttcatggggagttgcatagggatgaac 270
Query: 541 aaraggggttaccatcttgggaactcgagagactatatattgggacagataattggtgtt 600
|| ||||||||||||||| ||||||| | | |||||||||| ||| |||||| | ||
Sbjct: 269 aaaaggggttaccatctttggaactctaaatactatatatttttacatataatttttctt 210
Query: 601 atgtgtggctcttccagaaaattcacttcttaattgtaccctttcaaatacaaagaactg 660
|| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 atatgtcgctcttccataaaattcacttcttaattgtaccctttcaaatacaaagaactt 150
Query: 661 actattttcttttgcvacagtatcaactaaatcacatcgaatattgataatgggctattc 720
||||||||||||||| |||||||||||||||||||||| |||||| ||||| ||||||
Sbjct: 149 actattttcttttgcaacagtatcaactaaatcacatctaatatttataatacactattc 90
Query: 721 acaatcaataatagcacttagcgtgatagcatttgttgtacttctacc 768
|||||||||||||||||||| | | ||| ||||| || ||||||||||
Sbjct: 89 acaatcaataatagcacttatctttatatcatttcttatacttctacc 42
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6463
Number of Sequences: 1807
Number of extensions: 6463
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)